BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB037E03LP1|AL430396
(880 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1278 1739 0.0
>3x_Contig1278
Length = 6932
Score = 1739 bits (876), Expect = 0.0
Identities = 878/880 (99%)
Strand = Plus / Plus
Query: 1 gatccagtcgatcatgtctttaaacgattcttggaaaacggaatccacttctattgataa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2771 gatccagtcgatcatgtctttaaacgattcttggaaaacggaatccacttctattgataa 2830
Query: 61 taatgaatgttttgcatcgttataaatctttacagtcttgtcctcgacctgaggtatcct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2831 taatgaatgttttgcatcgttataaatctttacagtcttgtcctcgacctgaggtatcct 2890
Query: 121 ttcattgacgaacttttcggatgaatccgggtcgttgatagtgtcggccttcccatgcat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2891 ttcattgacgaacttttcggatgaatccgggtcgttgatagtgtcggccttcccatgcat 2950
Query: 181 tatcaatagtgggcttttaaatgtctttgcaacatatgggtcattcaccaacttcttgcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2951 tatcaatagtgggcttttaaatgtctttgcaacatatgggtcattcaccaacttcttgcc 3010
Query: 241 tctttctagcatatcgtagatttgtttgaaagaacccgttaactttagcttagggtctgt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3011 tctttctagcatatcgtagatttgtttgaaagaacccgttaactttagcttagggtctgt 3070
Query: 301 tcttaacaactccttgtaatcttcatcgcttgtaatcccgtccacattcaatgctgtatc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3071 tcttaacaactccttgtaatcttcatcgcttgtaatcccgtccacattcaatgctgtatc 3130
Query: 361 gatcgtgaacctcggcaacacgcttgcyagtgcaggtgccaggcaacgcagaatgaaatt 420
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 3131 gatcgtgaacctcggcaacacgcttgctagtgcaggtgccaggcaacgcagaatgaaatt 3190
Query: 421 gggtcttgagttaggatgcaattcaatcaaagggcctgtcgtaatgattcctgcgatttt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3191 gggtcttgagttaggatgcaattcaatcaaagggcctgtcgtaatgattcctgcgatttt 3250
Query: 481 atccttgtacttaccattacacccgtagttcaatgcgattccgccacccatggaatggcc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3251 atccttgtacttaccattacacccgtagttcaatgcgattccgccacccatggaatggcc 3310
Query: 541 aaaaaggaacaatttgcgatctacgggttcacactctttcaagttcatctcgatgaaatg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3311 aaaaaggaacaatttgcgatctacgggttcacactctttcaagttcatctcgatgaaatg 3370
Query: 601 gtttaaatcagcaaaagtggcaacttcatcggttttccccctctcctttcctggggaggt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3371 gtttaaatcagcaaaagtggcaacttcatcggttttccccctctcctttcctggggaggt 3430
Query: 661 atcaccagatcctctttgatcgaacataaaactttcaacaccattcaaagctaaattatc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3431 atcaccagatcctctttgatcgaacataaaactttcaacaccattcaaagctaaattatc 3490
Query: 721 cataagtttgtaataaatcttgtagtattcacagaatccatgtacaatcaaaactctgca 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3491 cataagtttgtaataaatcttgtagtattcacagaatccatgtacaatcaaaactctgca 3550
Query: 781 ctttgtaataacttgttcgtcttctacatcagtggtgttagtgtgagtrttacgctcgtg 840
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 3551 ctttgtaataacttgttcgtcttctacatcagtggtgttagtgtgagtgttacgctcgtg 3610
Query: 841 cttcttaaggctggaaggccatttcatgtaggtgaaggtt 880
||||||||||||||||||||||||||||||||||||||||
Sbjct: 3611 cttcttaaggctggaaggccatttcatgtaggtgaaggtt 3650
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5706
Number of Sequences: 1807
Number of extensions: 5706
Number of successful extensions: 39
Number of sequences better than 1.0e-20: 1
length of query: 880
length of database: 10,358,551
effective HSP length: 16
effective length of query: 864
effective length of database: 10,329,639
effective search space: 8924808096
effective search space used: 8924808096
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)